The Physician AI Handbook

A Practical Guide for Clinicians Across All Specialties

What works. What doesn’t. What happens when AI is wrong.
Author
Published

December 2025

Welcome to The Physician AI Handbook

This handbook is a practical guide for navigating AI in clinical practice, written from a physician’s perspective. It’s designed for clinicians evaluating AI tools, but AI researchers, health system leaders, and anyone building or deploying clinical AI will also find it useful.

Three questions drive every chapter: Which AI tools work in real clinical settings? How do I assess vendor claims against peer-reviewed evidence? What are the medico-legal implications when AI is wrong?

The handbook covers five areas: foundations of clinical AI, specialty-specific applications across all ACGME disciplines, implementation and evaluation frameworks, practical tools for daily practice, and future directions. You can read sequentially or jump to the section most relevant to your work.

This resource is continuously updated as new research emerges.

Important Disclaimers

This handbook is for educational purposes only and does not constitute medical advice, diagnosis, or treatment. AI systems discussed herein are not substitutes for professional medical judgment.

Physicians remain solely responsible for clinical decisions, validating AI outputs before clinical use, ensuring regulatory compliance (FDA, HIPAA), and meeting the standard of care in their jurisdiction.

Information may become outdated given the rapidly evolving nature of AI technology. Verify recommendations with current clinical guidelines before application.

This handbook does not provide legal advice. Consult qualified legal counsel for malpractice and liability questions.


Quick Start: Choose Your Path

Select the pathway that matches your specialty and immediate needs:

Primary Care & Family Medicine

“I need practical AI tools for my daily practice”

Start here:

Diagnostic Specialties

“Radiology, Pathology, Dermatology, Ophthalmology”

Start here:

Surgical Specialties

“General Surgery, Orthopedics, Neurosurgery, OBGYN”

Start here:

Medical Specialties

“Internal Medicine, Cardiology, Oncology, Neurology”

Start here:

Emergency & Critical Care

“I work in fast-paced, high-stakes clinical environments”

Start here:

Pediatrics & Neonatology

“I care for pediatric and newborn patients”

Start here:


What is this handbook?

The Physician AI Handbook is an open-source clinical field guide to AI in medicine. All ACGME specialties • Continuously updated • Free and open-source.


Why This Handbook?

What you’ll get:

  • Evidence-based guidance with citations from JAMA, NEJM, Lancet, Nature Medicine, BMJ
  • Real clinical case studies (successes and failures)
  • Specialty-specific applications across medical disciplines
  • Honest assessments of what AI can and cannot do
  • Practical implementation guidance for your clinical workflow
  • Medical-legal considerations and liability frameworks
  • Open access forever

What you won’t get:

  • Hype without clinical evidence
  • Vendor marketing disguised as education
  • Theory without practical application

Book Structure: Your Roadmap

Part I: Foundations

AI history in medicine, fundamentals, clinical data challenges

Chapters 1-3 | Start here if new to AI

Key topics: Medical AI history (MYCIN to modern deep learning), AI fundamentals for clinicians, EHR data quality, clinical datasets

Part II: Clinical Specialties

AI applications across all ACGME-recognized medical specialties

Chapters 4-22 | Jump to your specialty

Key topics: Radiology, Internal Medicine, Surgery, Anesthesiology, Pediatrics, OBGYN, Emergency Medicine, Critical Care, Oncology, Cardiology, Neurology, Psychiatry, Primary Care, Pathology, Dermatology, Ophthalmology, Orthopedics, Infectious Diseases, and more

Part III: Implementation & Evaluation

Clinical deployment, ethics, privacy, safety, liability

6 chapters | Critical for implementation

Key topics: Evaluating AI tools, medical ethics & equity, HIPAA compliance, clinical AI safety, workflow integration, medical liability & malpractice

Part IV: Practical Tools

Hands-on guidance for AI in daily practice

4 chapters | Immediately applicable

Includes: AI toolkit for physicians, LLMs in clinical practice (ChatGPT, Claude, Copilot), AI-assisted documentation (ambient scribes), clinical research with AI

Part V: The Future

Emerging technologies, policy, global health, future perspectives

5 chapters | Forward-looking

Topics: Emerging AI technologies, global health equity, healthcare policy & governance, medical misinformation, the physician-AI partnership


How to use this handbook

Choose Your Path

  • For specialists → Jump to your specialty chapter
  • For generalists → Start with Primary Care & Practical Tools
  • For residents/students → Read sequentially Part I → V
  • For administrators → Focus on Implementation & Ethics

License & Citation

This work is licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0).

You are free to: Share, adapt, and use this material for any purpose, including commercial use, with attribution.

Full license details | CC BY 4.0 Legal Code

How to Cite

Tegomoh, B. (2025). The Physician AI Handbook: A Practical Guide for Clinicians Across All Specialties. https://physicianaihandbook.com